MySQL

https://www.mysql.com

Install

Install Ibis and dependencies for the MySQL backend:

Install with the mysql extra:

pip install 'ibis-framework[mysql]'

And connect:

import ibis

con = ibis.mysql.connect()
1
Adjust connection parameters as needed.

Install for MySQL:

conda install -c conda-forge ibis-mysql

And connect:

import ibis

con = ibis.mysql.connect()
1
Adjust connection parameters as needed.

Install for MySQL:

mamba install -c conda-forge ibis-mysql

And connect:

import ibis

con = ibis.mysql.connect()
1
Adjust connection parameters as needed.

Connect

ibis.mysql.connect

con = ibis.mysql.connect(
    user="username",
    password="password",
    host="hostname",
    port=3306,
    database="database",
)
Note

ibis.mysql.connect is a thin wrapper around ibis.backends.mysql.Backend.do_connect.

Connection Parameters

do_connect

do_connect(self, host='localhost', user=None, password=None, port=3306, database=None, autocommit=True, **kwargs)

Create an Ibis client using the passed connection parameters.

Parameters
Name Type Description Default
host str Hostname 'localhost'
user str | None Username None
password str | None Password None
port int Port 3306
database str | None Database to connect to None
autocommit bool Autocommit mode True
kwargs Additional keyword arguments passed to pymysql.connect {}
Examples
>>> import os
>>> import getpass
>>> host = os.environ.get("IBIS_TEST_MYSQL_HOST", "localhost")
>>> user = os.environ.get("IBIS_TEST_MYSQL_USER", getpass.getuser())
>>> password = os.environ.get("IBIS_TEST_MYSQL_PASSWORD")
>>> database = os.environ.get("IBIS_TEST_MYSQL_DATABASE", "ibis_testing")
>>> con = connect(database=database, host=host, user=user, password=password)
>>> con.list_tables()
[...]
>>> t = con.table("functional_alltypes")
>>> t
MySQLTable[table]
  name: functional_alltypes
  schema:
    id : int32
    bool_col : int8
    tinyint_col : int8
    smallint_col : int16
    int_col : int32
    bigint_col : int64
    float_col : float32
    double_col : float64
    date_string_col : string
    string_col : string
    timestamp_col : timestamp
    year : int32
    month : int32

ibis.connect URL format

In addition to ibis.mysql.connect, you can also connect to MySQL by passing a properly-formatted MySQL connection URL to ibis.connect:

con = ibis.connect(f"mysql://{user}:{password}@{host}:{port}/{database}")

mysql.Backend

add_operation

add_operation(self, operation)

Add a translation function to the backend for a specific operation.

Operations are defined in ibis.expr.operations, and a translation function receives the translator object and an expression as parameters, and returns a value depending on the backend.

begin

begin(self)

compile

compile(self, expr, limit=None, params=None, pretty=False, **kwargs)

Compile an Ibis expression to a SQL string.

connect

connect(self, *args, **kwargs)

Connect to the database.

Parameters

Name Type Description Default
*args Mandatory connection parameters, see the docstring of do_connect for details. ()
**kwargs Extra connection parameters, see the docstring of do_connect for details. {}

Notes

This creates a new backend instance with saved args and kwargs, then calls reconnect and finally returns the newly created and connected backend instance.

Returns

Type Description
ibis.backends.BaseBackend An instance of the backend

create_database

create_database(self, name, force=False)

Create a database named name in catalog.

Parameters

Name Type Description Default
name str Name of the database to create. required
catalog str | None Name of the catalog in which to create the database. If None, the current catalog is used. None
force bool If False, an exception is raised if the database exists. False

create_table

create_table(self, name, obj=None, *, schema=None, database=None, temp=False, overwrite=False)

Create a new table.

Parameters

Name Type Description Default
name str Name of the new table. required
obj pandas.pandas.DataFrame | pyarrow.pyarrow.Table | ibis.ibis.Table | None An Ibis table expression or pandas table that will be used to extract the schema and the data of the new table. If not provided, schema must be given. None
schema ibis.ibis.Schema | None The schema for the new table. Only one of schema or obj can be provided. None
database str | None Name of the database where the table will be created, if not the default. None
temp bool Whether a table is temporary or not False
overwrite bool Whether to clobber existing data False

Returns

Type Description
Table The table that was created.

create_view

create_view(self, name, obj, *, database=None, schema=None, overwrite=False)

disconnect

disconnect(self)

drop_database

drop_database(self, name, force=False)

Drop the database with name in catalog.

Parameters

Name Type Description Default
name str Name of the schema to drop. required
catalog str | None Name of the catalog to drop the database from. If None, the current catalog is used. None
force bool If False, an exception is raised if the database does not exist. False

drop_table

drop_table(self, name, database=None, force=False)

drop_view

drop_view(self, name, *, database=None, schema=None, force=False)

execute

execute(self, expr, limit='default', **kwargs)

Execute an expression.

get_schema

get_schema(self, name, *, catalog=None, database=None)

has_operation

has_operation(cls, operation)

insert

insert(self, table_name, obj, schema=None, database=None, overwrite=False)

Insert data into a table.

Parameters

Name Type Description Default
table_name str The name of the table to which data needs will be inserted required
obj pandas.pandas.DataFrame | ibis.ibis.Table | list | dict The source data or expression to insert required
schema str | None [deprecated] The name of the schema that the table is located in None
database str | None Name of the attached database that the table is located in. For backends that support multi-level table hierarchies, you can pass in a dotted string path like "catalog.database" or a tuple of strings like ("catalog", "database"). ::: {.callout-note} ## Ibis does not use the word schema to refer to database hierarchy. A collection of tables is referred to as a database. A collection of database is referred to as a catalog. These terms are mapped onto the corresponding features in each backend (where available), regardless of whether the backend itself uses the same terminology. ::: None
overwrite bool If True then replace existing contents of table False

list_databases

list_databases(self, like=None)

List existing databases in the current connection.

Ibis does not use the word schema to refer to database hierarchy.

A collection of table is referred to as a database. A collection of database is referred to as a catalog.

These terms are mapped onto the corresponding features in each backend (where available), regardless of whether the backend itself uses the same terminology.

Parameters

Name Type Description Default
like str | None A pattern in Python’s regex format to filter returned database names. None
catalog str | None The catalog to list databases from. If None, the current catalog is searched. None

Returns

Type Description
list[str] The database names that exist in the current connection, that match the like pattern if provided.

list_tables

list_tables(self, like=None, schema=None, database=None)

List the tables in the database.

Parameters

Name Type Description Default
like str | None A pattern to use for listing tables. None
schema str | None [deprecated] The schema to perform the list against. None
database tuple[str, str] | str | None Database to list tables from. Default behavior is to show tables in the current database (self.current_database). ::: {.callout-note} ## Ibis does not use the word schema to refer to database hierarchy. A collection of tables is referred to as a database. A collection of database is referred to as a catalog. These terms are mapped onto the corresponding features in each backend (where available), regardless of whether the backend itself uses the same terminology. ::: None

raw_sql

raw_sql(self, query, **kwargs)

read_csv

read_csv(self, path, table_name=None, **kwargs)

Register a CSV file as a table in the current backend.

Parameters

Name Type Description Default
path str | pathlib.Path The data source. A string or Path to the CSV file. required
table_name str | None An optional name to use for the created table. This defaults to a sequentially generated name. None
**kwargs typing.Any Additional keyword arguments passed to the backend loading function. {}

Returns

Type Description
ibis.ibis.Table The just-registered table

read_delta

read_delta(self, source, table_name=None, **kwargs)

Register a Delta Lake table in the current database.

Parameters

Name Type Description Default
source str | pathlib.Path The data source. Must be a directory containing a Delta Lake table. required
table_name str | None An optional name to use for the created table. This defaults to a sequentially generated name. None
**kwargs typing.Any Additional keyword arguments passed to the underlying backend or library. {}

Returns

Type Description
ibis.ibis.Table The just-registered table.

read_json

read_json(self, path, table_name=None, **kwargs)

Register a JSON file as a table in the current backend.

Parameters

Name Type Description Default
path str | pathlib.Path The data source. A string or Path to the JSON file. required
table_name str | None An optional name to use for the created table. This defaults to a sequentially generated name. None
**kwargs typing.Any Additional keyword arguments passed to the backend loading function. {}

Returns

Type Description
ibis.ibis.Table The just-registered table

read_parquet

read_parquet(self, path, table_name=None, **kwargs)

Register a parquet file as a table in the current backend.

Parameters

Name Type Description Default
path str | pathlib.Path The data source. required
table_name str | None An optional name to use for the created table. This defaults to a sequentially generated name. None
**kwargs typing.Any Additional keyword arguments passed to the backend loading function. {}

Returns

Type Description
ibis.ibis.Table The just-registered table

reconnect

reconnect(self)

Reconnect to the database already configured with connect.

register_options

register_options(cls)

Register custom backend options.

rename_table

rename_table(self, old_name, new_name)

Rename an existing table.

Parameters

Name Type Description Default
old_name str The old name of the table. required
new_name str The new name of the table. required

sql

sql(self, query, schema=None, dialect=None)

table

table(self, name, schema=None, database=None)

Construct a table expression.

Parameters

Name Type Description Default
name str Table name required
schema str | None [deprecated] Schema name None
database tuple[str, str] | str | None Database name None

Returns

Type Description
Table Table expression

to_csv

to_csv(self, expr, path, *, params=None, **kwargs)

Write the results of executing the given expression to a CSV file.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Table The ibis expression to execute and persist to CSV. required
path str | pathlib.Path The data source. A string or Path to the CSV file. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
kwargs typing.Any Additional keyword arguments passed to pyarrow.csv.CSVWriter {}
https required

to_delta

to_delta(self, expr, path, *, params=None, **kwargs)

Write the results of executing the given expression to a Delta Lake table.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Table The ibis expression to execute and persist to Delta Lake table. required
path str | pathlib.Path The data source. A string or Path to the Delta Lake table. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
kwargs typing.Any Additional keyword arguments passed to deltalake.writer.write_deltalake method {}

to_pandas

to_pandas(self, expr, *, params=None, limit=None, **kwargs)

Execute an Ibis expression and return a pandas DataFrame, Series, or scalar.

Note

This method is a wrapper around execute.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to execute. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
limit int | str | None An integer to effect a specific row limit. A value of None means “no limit”. The default is in ibis/config.py. None
kwargs typing.Any Keyword arguments {}

to_pandas_batches

to_pandas_batches(self, expr, *, params=None, limit=None, chunk_size=1000000, **kwargs)

Execute an Ibis expression and return an iterator of pandas DataFrames.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to execute. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
limit int | str | None An integer to effect a specific row limit. A value of None means “no limit”. The default is in ibis/config.py. None
chunk_size int Maximum number of rows in each returned DataFrame batch. This may have no effect depending on the backend. 1000000
kwargs typing.Any Keyword arguments {}

Returns

Type Description
collections.abc.Iterator[pandas.pandas.DataFrame] An iterator of pandas DataFrames.

to_parquet

to_parquet(self, expr, path, *, params=None, **kwargs)

Write the results of executing the given expression to a parquet file.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Table The ibis expression to execute and persist to parquet. required
path str | pathlib.Path The data source. A string or Path to the parquet file. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
**kwargs typing.Any Additional keyword arguments passed to pyarrow.parquet.ParquetWriter {}
https required

to_polars

to_polars(self, expr, *, params=None, limit=None, **kwargs)

Execute expression and return results in as a polars DataFrame.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to export to polars. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
limit int | str | None An integer to effect a specific row limit. A value of None means “no limit”. The default is in ibis/config.py. None
kwargs typing.Any Keyword arguments {}

Returns

Type Description
dataframe A polars DataFrame holding the results of the executed expression.

to_pyarrow

to_pyarrow(self, expr, *, params=None, limit=None, **kwargs)

Execute expression and return results in as a pyarrow table.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to export to pyarrow required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
limit int | str | None An integer to effect a specific row limit. A value of None means “no limit”. The default is in ibis/config.py. None
kwargs typing.Any Keyword arguments {}

Returns

Type Description
Table A pyarrow table holding the results of the executed expression.

to_pyarrow_batches

to_pyarrow_batches(self, expr, *, params=None, limit=None, chunk_size=1000000, **_)

Execute expression and return an iterator of pyarrow record batches.

This method is eager and will execute the associated expression immediately.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to export to pyarrow required
limit int | str | None An integer to effect a specific row limit. A value of None means “no limit”. The default is in ibis/config.py. None
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Mapping of scalar parameter expressions to value. None
chunk_size int Maximum number of rows in each returned record batch. 1000000

Returns

Type Description
RecordBatchReader Collection of pyarrow RecordBatchs.

to_torch

to_torch(self, expr, *, params=None, limit=None, **kwargs)

Execute an expression and return results as a dictionary of torch tensors.

Parameters

Name Type Description Default
expr ibis.ibis.Expr Ibis expression to execute. required
params collections.abc.Mapping[ibis.ibis.Scalar, typing.Any] | None Parameters to substitute into the expression. None
limit int | str | None An integer to effect a specific row limit. A value of None means no limit. None
kwargs typing.Any Keyword arguments passed into the backend’s to_torch implementation. {}

Returns

Type Description
dict[str, torch.torch.Tensor] A dictionary of torch tensors, keyed by column name.

truncate_table

truncate_table(self, name, database=None, schema=None)

Delete all rows from a table.

Parameters

Name Type Description Default
name str Table name required
database str | None Name of the attached database that the table is located in. For backends that support multi-level table hierarchies, you can pass in a dotted string path like "catalog.database" or a tuple of strings like ("catalog", "database"). ::: {.callout-note} ## Ibis does not use the word schema to refer to database hierarchy. A collection of tables is referred to as a database. A collection of database is referred to as a catalog. These terms are mapped onto the corresponding features in each backend (where available), regardless of whether the backend itself uses the same terminology. ::: None
schema str | None [deprecated] Schema name None
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